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Detailed information on CNT30278100


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30380741Chenopodium quinoaManihot esculenta17.328.6784.8886forward
CNT30525117Chenopodium quinoaPhaseolus vulgaris14.2923.6792.9671forward

Expression of CNT30278100

Peptides detected in this lncRNA

>peptide 1 (83 aa)
VSYRVLKKKKKKVITCFTIGCISRGNLRANSSSTNESSEGQSPRHTVVDGNNLVFLLLSLADDLVRLNACNLCWLHGGVRSIQ*

Sequence

>CNT30278100
GTATCTTACCGTGTATTAAAAAAAAAAAAAAAAAAAGTAATTACCTGCTTCACCATAGGCTGCATCAGCAGGGGAAACCTTAGAGCCAACAGCAGCAGCA
CCAATGAGAGCAGTGAGGGCCAATCGCCTCGACACACCGTCGTTGATGGCAATAACCTCGTCTTCCTGCTTCTGAGCCTTGCAGACGATCTGGTTAGGCT
TAATGCTTGCAACCTGTGCTGGCTGCATGGTGGTGTAAGAAGCATCCAGTAGATGCCATTTTCGTTATCGCGCACACACTCATAAGTCACTTACAACCAG
CTCGCCTTCACCTCTCTCTTTCTCTCTCCTTATTTTTGTTGCTCTTGTGAATTATTTGTGGGTGGGAAAGAAAGTATAAGGTTGTTAAGTGATGAAGAAA
TTTGGAGGAAATGGTTTAAGATATCAGAGTTGGATGATGTAAAGATTAGATTATGAGGGAAAGATAAGGTTGTTGAGGACTCTATTGGTTCCACGTT