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Detailed information on CNT30498420


BLAST search results

BLAST vs Swiss-Prot:
sp|P0C5B3|MT1A_ORYSJ, E-value = 8e-19

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30447497Digitaria exilisSaccharum spontaneum5.8320.2997.6242reverse complement
CNT30107782Digitaria exilisOryza longistaminata16.6726.283.33120forward
CNT30575830Digitaria exilisOryza barthii10.9722.2591.1479forward
CNT30558730Digitaria exilisPanicum hallii12.2220.5689.7788forward

Expression of CNT30498420

Sequence

>CNT30498420
CGGTGGGAATTAGGCAAAGCAAACCAGTTTTTATAAATTCATAGTCACTCTGGACCGATCATTACAGAGACACCTGCAGACATACCATACAGAGATGTAC
GCATGGTGTGTAAATATCAGCCCACACACGGGTACATGAATGAGCACAAGGCAAACGGCTCATCCTTATTGTCGTATCAGTAGTCGATCACACCACAAGC
AAGCAGAGTAGTAGTACACTGTACGTCCGTACGTCGTCATAGGCAAGCAATCAGATCAGCAGGTGCAGGGGTCGCACTTGCAGTTGGCGCCGCAGCTGCA
GCCGTGGGCGGTCTCGCCGGACTCGGCCGCCGCCTCCAACTGGGCCTGCTTCCTCTCGGGAGCCACGCCCAACACCACGGTGCTCTGAGCGCCGGAGCAG
TTAGAGCCGCAGCTGCAGCTTGATCCACAGCTGCAAGACATCTTCTTCAAGCTCTTCTGAAACTTAACAAGCTGAAATGATGTGCTCTGATGTGGAAGAT
ATTGCTGCTTTGAGATTGCTTGAGCACACTCAACCCCCAGGCCGCCTTTTATAGCAGTGAATCGATGGGTTCAGCCAAAGAGGCACACGCAACAAATACG
TGGTTGCGTGTCATAGGCTGTTGCCTCGAGAATTAGCCCTTATTGCTTGGGGGGGTGTTTAGTTGGGAGGAAAAAGTACTTTTTCTAGATGAATAGTGTG
TTGGGAAGCGTGTTTTGTGA