Detailed information on CNT30447497


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT301037Saccharum spontaneumZea mays41.5512.4589.5386forward
CNT30498420Saccharum spontaneumDigitaria exilis20.295.8397.6242reverse complement
CNT30558682Saccharum spontaneumPanicum hallii39.619.5989.0282reverse complement

Expression of CNT30447497

Peptides detected in this lncRNA

>peptide 1 (67 aa)
GGDVTHMDPPTIDIPIVSHRLNPITSHRVYPDLEEKSGGGAQASVAVLGVAPEKKAAAESGEAAHGCS

Sequence

>CNT30447497
TGGGAGGCGACGTGACGCATATGGATCCACCGACCATAGACATACCTATTGTCTCCCATCGCCTTAATCCCATCACCTCTCATCGCGTGTACCCTGACCT
GGAGGAGAAGAGCGGCGGCGGCGCTCAGGCCAGCGTCGCCGTCCTCGGCGTTGCCCCTGAGAAGAAGGCGGCGGCCGAGTCCGGCGAGGCCGCCCACGGC
TGCAGCT