Detailed information on CNT30486394


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9M5M7|RL10_EUPES, E-value = 1e-47

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672710Olea europaeaSetaria viridis41.8754.3185.88170forward
CNT30711461Olea europaeaGlycine max71.4386.5785.52290forward
CNT30568953Olea europaeaActinidia chinensis5039.1184.73203forward
CNT30610309Olea europaeaGossypium raimondii70.6945.2782.58287forward
CNT30364215Olea europaeaSorghum bicolor25.1230.6389.22102forward
CNT30370320Olea europaeaOryza glumipatula42.6127.3383.82173forward

Expression of CNT30486394

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MYLLQAIRAASSASLDTFSFSQLTNARRKGTHQLPSSSSLHRRS*

>peptide 2 (61 aa)
MKRVHPDPQVESILSCKLSHVLIAGNTSSFKCFTRHIFLFPTDQCTQKGNSSTPFFFIPTS*

>peptide 3 (31 aa)
MHAERELINSLLLHPYIVDPDLGIWHTTAEP*

Sequence

>CNT30486394
CCTTGAGGCTTGCCAAAAGCACCCCTCATACCAGTTTGGAGCCTATCAGCTCCAGCACATGACAACATCTTGTTAATTCGCAACACATGAAAAGGGTGCA
CCCGGACCCTCAGGTGGAAAGCATCCTTTCCTGCAAACTTAGTCATGTACTTATTGCAGGCAATACGAGCAGCTTCAAGTGCTTCACTAGACACATTTTC
CTTTTCCCAACTGACCAATGCACGCAGAAAGGGAACTCATCAACTCCCTTCTTCTTCATCCCTACATCGTAGATCCTGATCTTGGGATCTGGCACACCAC
GGCAGAACCGTGATTTTGGGTATGGCTTATTCTTTATTTGACGATAGCACCTAGCAGGTCCTGCGTACGAGTAGTCAACTCATCAAAACAATGTACTGAA
TTTTCT