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Detailed information on CNT30473249


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30676458Saccharum spontaneumSetaria viridis35.7142.3988.24170forward
CNT30524278Saccharum spontaneumSetaria italica18.283093.187forward
CNT3017074Saccharum spontaneumZea mays16.1826.6493.5177forward

Expression of CNT30473249

Peptides detected in this lncRNA

>peptide 1 (83 aa)
MWICCYLKGRRTMAGRQMRGADHAAGVGDGGGLATTTGKSMTTTLSSAAMKVAANAACLSVMPLRTSSTTTPSLNFTRHRCFTS

Sequence

>CNT30473249
CCGAAATTTATTCCAAAGATAACCAAACAATAGGGTAGTTGAACGGAGAGCGCACGGCGCAGATATTTGCCTTGCAGAGTTACAAGCTTACAGCTACTAC
ACCATGCATGCACTAACCGGGGACATATATATAGATACTACGAGTACTAGATAGAGCAGAACAAGCAATAAATAGTACAAGTACATACAGTAAGCAATAG
TACACCACCAACGCTGCAGACACATGTGGATCTGCTGCTACCTGAAAGGGCGCCGTACAATGGCCGGCAGACAGATGCGAGGAGCAGATCATGCCGCCGG
AGTCGGCGACGGCGGCGGCTTGGCGACGACGACGGGGAAGTCGATGACGACCACCTTGTCGAGCGCGGCCATGAAGGTGGCGGCGAACGCGGCGTGCCTG
TCGGTCATGCCTTTGAGGACATCCTCCACCACCACGCCCTCCTTGAACTTCACCAGGCACAGGTGCTTCACCTCTC