Detailed information on CNT30524278


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30224096Setaria italicaHordeum vulgare24.4817.0785.9271forward
CNT30441160Setaria italicaAegilops tauschii25.1717.9490.4173forward
CNT30473249Setaria italicaSaccharum spontaneum3018.2893.187forward

Expression of CNT30524278

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MPLRTSSTTTPSLNFTRHRCFTSPMPHSEWLCREDR

>peptide 2 (62 aa)
YLKRHRTMADRGSRLWRWLGDGDGEVDDDHLLECGHERGGERGVLLVGHVGGEVVGGGRPCL*

>peptide 3 (29 aa)
MATGKSMTTTFSSAAMNVAANAACFSWDT*

Sequence

>CNT30524278
CTACCTGAAAAGGCACCGTACAATGGCCGACAGAGGCTCACGCCTGTGGCGGTGGCTTGGCGATGGCGACGGGGAAGTCGATGACGACCACCTTCTCGAG
TGCGGCCATGAACGTGGCGGCGAACGCGGCGTGCTTCTCGTGGGACACGTAGGCGGTGAGGTCGTCGGCGGAGGTCGGCCATGCCTTTGAGGACGTCCTC
CACCACGACGCCCTCCTTGAACTTCACCAGGCACAGGTGCTTCACCTCCCCCATGCCGCACTCCGAATGGCTTTGCAGAGAGGATCGGAG