Detailed information on CNT3046699


BLAST search results

BLAST vs Swiss-Prot:
sp|P25777|ORYB_ORYSJ, E-value = 2e-26

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30534676Prunus dulcisEucalyptus grandis27.0837.4181.73104forward
CNT30651914Prunus dulcisRosa chinensis40.6233.1291.03156forward
CNT3032415Prunus dulcisTheobroma cacao42.7143.7387.2164forward

Expression of CNT3046699

Peptides detected in this lncRNA

>peptide 1 (34 aa)
GRDHLQHHKWDNHLGNSSQFRCSKPHSDIHSNHR*

>peptide 2 (61 aa)
AETIFNITNGIITWATVVSSGAANRILIFTATIDEAVVQEFKEATACLITWTIGEVSAVTW*

Sequence

>CNT3046699
GGCAGAGACCATCTTCAACATCACAAATGGGATAATCACTTGGGCAACAGTAGTCAGTTCCGGTGCAGCAAACCGCATTCTGATATTCACAGCAACCATA
GATGAGGCAGTAGTCCAAGAATTCAAAGAGGCAACAGCATGTCTCATCACTTGGACAATAGGAGAAGTCTCCGCAGTCACTTGGTGAAGGAGAGGGAGGT
GGTGGTGGTGTCACTGGTGTAGGTGGTGTTGGTGGAGGGGGTGGTGGTGGAGCTGTTGGGGATGGTGCAGATGACTCCTTGGTAGGATATGAAGCCATGG
CATTGATTGCACAAACCCCATATTTTAAATTAGTGTTCCTTCTTATGTAAATGTATCCATCCATCCCCCAACTAGTCCCCCATG