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Detailed information on CNT30534676


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3046699Eucalyptus grandisPrunus dulcis37.4127.0881.73104forward
CNT30651914Eucalyptus grandisRosa chinensis35.9721.2382100forward

Expression of CNT30534676

Peptides detected in this lncRNA

>peptide 1 (37 aa)
LILTATVDQAVIEELENAAACFIGGAIREVSAFTRRG*

>peptide 2 (91 aa)
SHTHSNRRSSSNRRTRKCSSMFHRWGNKRSLRIHSARVREEEEEAVVLLAKAGTAGWSEMARGKTPWWDKRPSHLSRKHHTLSHCSSGYRST

Sequence

>CNT30534676
TTCTCATACTCACAGCAACCGTAGATCAAGCAGTAATCGAAGAACTCGAAAATGCAGCAGCATGTTTCATCGGTGGGGCAATAAGAGAAGTCTCCGCATT
CACTCGGCGAGGGTGAGGGAGGAGGAGGAGGAGGCGGTGGTGTTGCTGGCGAAGGCGGGGACGGCGGGCTGGTCGGAGATGGCGAGGGGGAAGACTCCTT
GGTGGGATAAGAGGCCATCGCATTTATCGCGCAAACACCATACTCTAAGTCACTGTTCCTCAGGATATAGAAGTACCC