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Detailed information on CNT30443000


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30306475Aegilops tauschiiTriticum aestivum33.6950.894.94158forward
CNT30400175Aegilops tauschiiTriticum turgidum44.9965.5396.21211forward
CNT30137781Aegilops tauschiiLolium perenne24.5251.5785.22115forward
CNT30366883Aegilops tauschiiSorghum bicolor24.9520.2885.47117forward
CNT30150459Aegilops tauschiiBrachypodium distachyon69.0850.3986.11324forward

Expression of CNT30443000

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MLKPKKGQDNKTHGASYDSLTMDNKSPLHLNSQLSELRTDATDS*

Sequence

>CNT30443000
ATTCAATAAAAAGGCTCAATGTACGTCAACAATTACATTACATTCTGGCATGAAGTAATTGAGATTTATTAGCATCCATATACAATTCACAATAGGTACT
TCACAGGCATCCTCGTGATCCAGATGCTAAAGCCAAAAAAGGGACAAGATAATAAAACTCACGGAGCTAGCTATGATAGTTTAACCATGGATAACAAATC
ACCACTTCATCTTAACAGCCAGCTTTCAGAACTCAGAACTGATGCCACAGATAGCTAAATTTAGAGGGCGGCATTCACTGGCCACAGCATCGACCTTCAC
CATGTCAACAGAAAATTAGGGAGAAGAGCACTGTTACTCAATCTTCACAGACGAGTAAATCAGCCTAGTGAACATTAAACAGGCGTAGAATCCAATTGTA
CCCGTCAAGGCAAAGAACGCATATGAGGCGATGAGCATGTAGCCGAAGTAAAGGATGGCTGACACAAAC