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Detailed information on CNT30400175


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30306475Triticum turgidumTriticum aestivum59.9462.0698.96193forward
CNT30443000Triticum turgidumAegilops tauschii65.5344.9996.21211forward
CNT30137781Triticum turgidumLolium perenne32.346.6486.54104forward
CNT30150459Triticum turgidumBrachypodium distachyon35.7117.8887.83115forward

Expression of CNT30400175

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MLKPKKGQENKTHGASYDSLTMDNTSPLHLNSQLSELRTDATHS*

>peptide 2 (44 aa)
MYINNYITFWHEVIEIYQHPYTIHNRYFISIHIQFTTGTSQASS*

Sequence

>CNT30400175
CTGCAGTAGTATATTCAATAAAAAGGCTCAATGTACATCAACAATTACATTACATTCTGGCATGAAGTAATTGAGATTTATCAGCATCCATATACAATTC
ACAACAGGTACTTTATCAGCATCCACATACAATTCACAACTGGTACTTCACAGGCATCCTCGTGATCCAGATGCTAAAGCCAAAAAAAGGACAAGAGAAT
AAAACTCACGGAGCTAGCTATGATAGTTTAACCATGGATAACACATCACCACTTCATCTTAACAGCCAGCTTTCAGAACTCAGAACTGATGCCACACATA
GCTAAATTTAGAGGGCGGCATT