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Detailed information on CNT30441637


BLAST search results

BLAST vs Swiss-Prot:
sp|P31691|ADT_ORYSJ, E-value = 3e-52

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671274Aegilops tauschiiSetaria viridis52.0525.6184.21190forward
CNT30722298Aegilops tauschiiTriticum spelta57.8127.5198.58211forward
CNT3058427Aegilops tauschiiAmborella trichopoda28.4934.6782.69104forward

Expression of CNT30441637

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MLRARTPSEKLEARWNCPPNFCMTDGWLARSAISD

>peptide 2 (51 aa)
MTLAVFPLHSEPKPSSLMVRPKQSPIPLYGSESLPALIISSWGCIGKQWRR*

Sequence

>CNT30441637
TGAGTTGGGAAGTAACGGATGACGTTAGCAGTGTTTCCTCTCCACAGTGAGCCAAAGCCTTCATCCTTGATGGTGCGCCCAAAGCAGTCACCAATACCCT
TGTATGGCTCAGAGAGCCTGCCAGCCTTGATCATCTCATCCTGGGGGTGCATTGGCAAACAATGGAGAAGATGACATCATTGGGACACTGATGCCAAGGT
TCTGAGTCATGTAGCTGCTTGTGGTGAAGCGCCTCTCATAGGATGGCACAGAAGGGCAGATGTTGCGAGCACGAACACCCTCAGAGAAGCTGGAGGCAAG
GTGGAACTGTCCACCAAACTTCTGCATGACAGACGGGTGGTTAGCACGGTCCGCCATCTCTGACC