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Detailed information on CNT30435185


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30249262Aegilops tauschiiAvena sativa39.677.9194.01217reverse complement
CNT30314095Aegilops tauschiiCamelina sativa27.9710.296.08153reverse complement
CNT30726123Aegilops tauschiiLupinus angustifolius31.995.2896.57175forward

Expression of CNT30435185

Peptides detected in this lncRNA

>peptide 1 (72 aa)
MKLKSLVIADQHAAVNMYPGPVHTARHTLGIGFARSIGPMITHDFCVPLVPQRPLVVLLAHTTVGSSTGVKS*

>peptide 2 (98 aa)
TSSWRQRKTRHEGQKMVWNVVVIVRALLRNKEKGACRTHEGLPVRYWRKVGMTSSPHGPYGLGHTRATMAMTMGSKAVRRSESGKIASVRIVLCNSGT*

Sequence

>CNT30435185
ACGTCGAGTTGGCGGCAGAGGAAGACTCGGCATGAAGGCCAGAAAATGGTGTGGAACGTAGTGGTAATAGTACGCGCCCTGCTCCGAAACAAAGAAAAAG
GTGCGTGCCGCACTCACGAGGGACTGCCAGTGAGATACTGGAGGAAGGTGGGGATGACGTCAAGTCCGCATGGCCCTTATGGGCTGGGCCACACACGTGC
TACAATGGCAATGACAATGGGAAGCAAGGCTGTAAGGCGGAGCGAATCCGGAAAGATTGCCTCAGTTCGGATTGTTCTCTGCAACTCGGGAACATGAAGT
TGAAATCGCTAGTAATCGCGGATCAGCATGCCGCGGTGAATATGTACCCGGGCCCTGTACACACCGCCCGTCACACCCTGGGAATTGGTTTCGCCCGAAG
CATCGGACCAATGATCACCCATGACTTCTGTGTACCACTAGTGCCACAAAGGCCTTTGGTGGTCTTATTGGCGCATACCACGGTGGGGTCTTCGACTGGG
GTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGTGGCTGGATTGA