Detailed information on CNT30314095


BLAST search results

BLAST vs Swiss-Prot:
sp|P92565|M1370_ARATH, E-value = 2e-53

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671254Camelina sativaSetaria viridis5.0726.3996.0576forward
CNT30158473Camelina sativaPistacia vera3.4723.8510052reverse complement
CNT30637323Camelina sativaCapsicum annuum3031.8784.44450reverse complement
CNT3098505Camelina sativaSolanum tuberosum31.0747.586.48466forward
CNT30383362Camelina sativaTriticum turgidum7.3321.4895.45110forward
CNT30147387Camelina sativaMedicago truncatula920.2195.56135forward
CNT30435185Camelina sativaAegilops tauschii10.227.9796.08153reverse complement
CNT30263293Camelina sativaBrassica rapa23.9385.8986.91359forward
CNT30203140Camelina sativaHelianthus annuus11.225.7395.83168reverse complement
CNT30360998Camelina sativaLactuca sativa8.8745.8696.24133reverse complement

Expression of CNT30314095

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MNVDCVVQIISEKGFVFTEVEAIHELNFEVAYARKEFRSQLRRSLPYIVQPGM*

>peptide 2 (63 aa)
MSKKSAKGLRDLVFICCSINKAVYTEKKENSVIGFEQLSCYNVLFHFNKVTPSRCFFSSSYEI*

>peptide 3 (48 aa)
MKFSFYFFTGLGPCLLNNLSKYGARRFHISRSEWDWVFSRLTVVPGLS*

>peptide 4 (48 aa)
MREKSFALNFDVLCPILSSQGCKSSWLVKKHWSSLSLTLNGNLEFQSS*

>peptide 5 (79 aa)
MNKKENGTIGFSCDSPPATCPKDQKPARRQWVGRKLAPYLGWGKRNEVHREGFNPATGSPTATLLRIHPSQRPHRGMRQ*

>peptide 6 (31 aa)
FNRERYRIVEESKQLRQERTYKITWKMRFHF*

>peptide 7 (30 aa)
MELLDLVVTRPRLPVQRTKSPPAASGWEGS*

Sequence

>CNT30314095
CTTTAATCGAGAGAGGTACAGAATAGTCGAAGAAAGTAAGCAACTGCGACAAGAAAGGACTTATAAGATAACATGGAAAATGAGATTTCACTTCTAGTTA
TCCGCCAAGGAAATGCCGGAGGAATTCTATATATAGCTGAGCGATGATCGTTTTGTTGTGCATCTTGGATACAGTACCAAAGGGTCTGCTCTACTAAAAC
TTTGTCATAATGAGAGCGGGGATCATGAAAATTGAAACTATTCATGTTGTTTTCTATAAACTCCAAGGCTTCTAGTCTTATGGCCCAGGGTGATTGAGAT
CAAATTTTGATTAGGCGCGCATCCGGTTCGTTTACCAATAAAGTAAAAAGTTTCTTTTGTAAATGTGCTTTCCGCTCCATTATTCTAATGTCGAATAGCT
CGTTGTTTAGGGCACTTTGATAGTGATGAATGTTGACTGCGTGGTCCAAATAATCTCTGAAAAAGGTTTCGTATTTACCGAAGTGGAGGCAATCCATGAA
CTAAATTTCGAGGTTGCGTATGCGCGAAAAGAGTTTCGCTCTCAACTTCGACGTTCTCTGCCCTATATTGTCCAGCCAGGGATGTAAATCAAGTTGGCTG
GTTAAAAAACATTGGTCCAGCTTAAGCTTGACGTTGAATGGGAATTTAGAGTTCCAATCCAGCTAGAAGAAGCGTTGTTATAAGCGGCAAAAGCTACGAG
ATTCGAATCATAGGCAAGGAGTTGTGTCAAGAAAAAACAAAAGACAATCGAAATGGACAATCGGACGGATGGCAAAAAGATCCAATAACTGAGAAAGACA
AAACAAAGATTCTTTTCGAGAAAATAGAAATAAGACAAGATATATGAGCAAGAAATCTGCCAAAGGTCTTCGAGATCTTGTATTTATATGTTGCTCTATT
AACAAAGCCGTGTATACCGAAAAAAAAGAGAATAGCGTTATCGGGTTTGAACAACTGAGTTGTTATAATGTTCTTTTTCATTTTAATAAAGTGACTCCGT
CACGATGTTTTTTTTCCTCTTCTTATGAAATATGAAATTTTCATTTTATTTCTTCACCGGGCTTGGACCATGTCTCCTGAACAATCTCAGTAAATATGGC
GCAAGACGATTCCACATATCAAGGTCGGAATGGGATTGGGTGTTTTCACGTCTCACCGTAGTGCCCGGTTTGTCTTGATTTCCGATTGATGAACAAGAAG
GAAAATGGAACTATTGGATTTAGTTGTGACTCGCCCCCGGCTACCTGTCCAAAGGACCAAAAGCCCGCCCGCCGCCAGTGGGTGGGAAGGAAGCTAGCCC
CCTATCTTGGTTGGGGGAAGAGGAACGAAGTCCATCGCGAAGGATTCAATCCAGCCACAGGTTCCCCTACGGCTACCTTGTTACGAATTCACCCCAGTCA
AAGACCCCATCGTGGTATGCGCCAATAAGACCACCAAAAGACTTTGTGGCACTAGTGGTACACAGAAGTCATGGGTGATCATTGGTCCAATGCTTCGGTG