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Detailed information on CNT3040132


BLAST search results

BLAST vs Swiss-Prot:
sp|P27522|CB13_SOLLC, E-value = 9e-40

BLAST vs NONCODE:
NONPPAT000404, E-value = 4e-13

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673615Marchantia polymorphaSetaria viridis24.6223.8383.93112forward
CNT30368340Marchantia polymorphaSorghum bicolor24.6224.7883.93112forward
CNT30583045Marchantia polymorphaEchinochloa crusgalli24.6214.4983.93112forward

Expression of CNT3040132

Peptides detected in this lncRNA

>peptide 1 (65 aa)
MKYPRTASMARRPFFTSFTFRSFIDFSSLPKPKKLNRGPPGYAGSPDPPNTFSKPKKISLPNTLRR

Sequence

>CNT3040132
ATGCAACGTAATGGTTCCACTGAAAACTCGGCAGAGTGCGGCTTTATAAATCCTAAAATCGGAGAGGAGTGACATGATAAGTCGGTCATGATACAAAGTG
GTGACGGCAACATAAGCCTCCTAAATTAGATCGGCGAAACATCAATATGAACACTTTCTAGTGAATTTTCAGGTTGGTGAGGACATTGTTGTTGGCGGGG
TCTGACAAGTGGTCCAACAAGTTCTGGAATGGGCCGACACCGGTGAAGATCGCTTGGATGAAGTATCCGAGGACTGCGAGCATGGCCAGGCGTCCGTTCT
TCACTTCCTTCACTTTCAGGTCCTTCATCGACTTCTCGTCCCTTCCGAAGCCCAAGAAGTTGAACAGAGGACCTCCGGGGTACGCTGGGTCACCTGATCC
TCCCAACACCTTCTCGAAACCCAAGAAAATTAGCCTGCCCAACACGCTTCGGCGA