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Detailed information on CNT30397780


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30730619Triticum turgidumCorchorus capsularis39.3757.3290.51137forward
CNT30511593Triticum turgidumSolanum lycopersicum39.3721.0488.32137forward
CNT30115272Triticum turgidumEutrema salsugineum39.3728.1988.32137forward

Expression of CNT30397780

Peptides detected in this lncRNA

>peptide 1 (30 aa)
DFPRASGITAETATGSPPIRGWSDRSMEIG*

Sequence

>CNT30397780
CGACTTCCCTAGAGCCTCCGGTATCACAGCCGAGACAGCGACGGGTTCTCCACCCATACGGGGATGGAGCGACAGAAGTATGGAAATAGGATAAGGTAGC
GGCGAGACGAGCCGTTTAAATAGGATAAGGTAGCGGCGAGACGAGCCGTTTAAATAGGTGTCAAGTGGAAGTGCAGTGATGTATGCAGCTGAGGCATCCT
AACGAACGAACGATTTGAACCTTGTTCCTACACGGCCTGATCAAATCGATCAGGCACTTGCCATCTATCTTCATTGTTCAACTCTTTGATGAAAAGATGA
AAAAACCAAAAAAAAGCTCTGCCCTTCCATCTCTTGGATAGATAGAGA