Detailed information on CNT30730619


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30493035Corchorus capsularisOlea europaea37.669.3285.5690forward
CNT30397780Corchorus capsularisTriticum turgidum57.3239.3790.51137forward
CNT30148461Corchorus capsularisBrachypodium distachyon57.3258.390.51137reverse complement
CNT30497700Corchorus capsularisDigitaria exilis57.3225.0590.51137reverse complement

Expression of CNT30730619

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MTRSIQSGTRHLFSLFNSLTTRKPIVQLFDNMKKPKALP

Sequence

>CNT30730619
ATTCAAGAGAAGGTCACGGCGAGACGAGCCGTTTATCATTACGATAGGTGTCAAGTGGAAGTGCAGTGATGTATGCAGCTGAGGCATCCTAACAGACCGG
TAGACTTGAACCTTGTTCCTACATGACCCGATCAATTCAATCAGGCACTCGCCATCTATTTTCATTGTTCAACTCTTTGACAACACGAAAACCCATTGTT
CAACTCTTTGACAACATGAAAAAACCAAAAGCTCTGCCC