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Detailed information on CNT30395103


BLAST search results

BLAST vs Swiss-Prot:
sp|P12329|CB21_MAIZE, E-value = 1e-115

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30552150Triticum turgidumOryza glaberrima45.648.7793.73415forward
CNT30251243Triticum turgidumAvena sativa64.460.4194.88586forward
CNT30456534Triticum turgidumSaccharum spontaneum45.9382.1292.82418forward

Expression of CNT30395103

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MQHLSVRTTQSHNGKKQRSTTTHMQQHPSAMKLSA*

>peptide 2 (44 aa)
MVMRPSPKGAALEAFTGVPAIAGEESAMVAPAIACYSLALLRVS*

Sequence

>CNT30395103
TTAAGCAGAAGAACAGAGATGCCTTGATTAATCTGAGAAAATAGCCAGATATTACACAAACACCATCTTAGTGTACACACACCAACTCCTCATCTCGACT
CGCCCTCACATGCAACATCTATCAGTCCGGACTACTCAATCTCACAACGGGAAGAAGCAGAGATCGACGACGACACACATGCAGCAGCATCCATCAGCCA
TGAAGTTGTCGGCCTAGAGGTTGAGCTGACCGCGCTCACTTGCCGGGGACGAAGTTGGTGGCGAAGGCCCAGGCGTTGTTGTTGACGGGGTCGGCGAGGT
GGTCGGCGAGGCCCAGGGGGTCGAAGCTGCCGCCGGGGTAGAGCGGGTCCACGATCTCGCCGAGCGGGCCGCCGGCGACGCGGTAGCCCTCCACGGCGCC
CATGAGCACCACCTGGCAGGCCCAGATGGCGAGGATGCTCTGCGCGTGCACCAGGCTGGGGTTGCCGAGGTAGTCGAGGCCGCCCTCGCTGAAGATCTGG
GAGCCGGCCTTGAACCACACGGCCTCGCCGAACTTGACGCCGTTGCGGGCGAGCAGCTCCGGGAAGACGCAGCCGAGCGCGCCGAGCATGGCCCAGCGGC
AGTGGATCACCTCCAGCTCCCGGTTCTTGGCGAAGGTCTCGGGGTCGGCGGAGAGCGGGCCGAGGTAGAGCACGCGGTCGGAGCCGTACCACGGGCTGCT
GGACGCCGCCACCTTGGGCTTGCCCGCCGTCTTGCGCATGGTGATGCGGCCCTCGCCGAAGGGCGCCGCCCTGGAGGCCTTCACCGGGGTGCCCGCCATC
GCCGGGGAGGAGAGCGCCATGGTCGCGCCCGCCATTGCGTGCTACTCGCTAGCTTTGCTTCGGGTGAGCTGAGGCTGGCAGTGGGAGGCGCTGGTGGTCG
TTGGTGCTGT