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Detailed information on CNT30251243


BLAST search results

BLAST vs Swiss-Prot:
sp|P12329|CB21_MAIZE, E-value = 2e-117

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30300174Avena sativaTriticum aestivum53.0959.3394.17515forward
CNT30395103Avena sativaTriticum turgidum60.4164.494.88586forward
CNT30441148Avena sativaAegilops tauschii54.5458.5289.22529forward

Expression of CNT30251243

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MVMRPSPKGEALEAFMGVPAIAGEESAMVEAAICSL*

Sequence

>CNT30251243
AGGTTGTTCGGTGAAAACTTAAACTGCTTGGACTTTCAGAAAGTTCAGAGATCTTAAGTAGTATTGACATTCAGAGAAACCAATAGTTAAGCAGAAGAAG
AAAGATTCCTTGATGAATAACCATAAACACCATGATCTTTAGTGTACAACACCAACTCCTCATCTGGACTCGCCTTAACATGATCCATCAGTGACGACAC
ACATGCAGCAGCAGCATCATTCAGCAATGAAGTGGTCGGCCAAGCGCGCGCACGCAGCACACGCTAGAGGTTGAGCGAACTAAGCTCTTACTTGCCGGGG
ACGAAGTTGGTGGCGAAGGCCCAGGCGTTGTTGTTGACGGGGTCGGCGAGGTGGTCGGCGAGGCCGAGGGGGTCGAAGCTGCCTCCGGGGTAGAGCGGGT
CGACGATCTCACCGAGCGGGCCGCCGGCAACGCGGTATCCCTCGACGGCGCCCATGAGCACGACTTGGCAGGCCCAGATGGCGAGGATGCTCTGGGCGTG
GACGAGGCTGGGGTTGCCGAGGTAGTCGAGGCCGCCCTCGCTGAAGATCTGGGAGCCGGCCTTGAACCAGACGGCCTCGCCGAACTTGACGCCGTTGCGG
GCGAGCAGCTCGGGGAAGACGCAGCCGAGGGCGCCGAGCATGGCCCAGCGGGAGTGGATGACCTCGAGCTCGCGGTTCTTGGCGAAGGTCTCGGGGTCGG
CGGAGAGCGGGCCGAGGTAGAGCACGCGGTCGGAGCCGTACCAGGGGCTGCCGGACGCGGACACCTTGGGCTTGCCGGCCGTCTTGCGCATGGTGATGCG
GCCCTCGCCGAAGGGGGAGGCCCTGGAGGCCTTCATGGGGGTGCCGGCCATCGCCGGGGAGGAGAGCGCCATGGTGGAGGCTGCCATTTGCTCGCTCTGA
TCGAGGTGAGGTGTGCTTCGAGTGAGCTCGGGTGGTAGGAGTTGCTGGTGTCTGTTGGTGCTGTGGAGTG