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Detailed information on CNT30225503


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 3e-89

BLAST vs NONCODE:
NONMTRT002042, E-value = 2e-52

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30386702Hordeum vulgareTriticum turgidum59.7954.6194.71397forward

Expression of CNT30225503

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MPSLSWILALTLSMVSELSTSRVMVFPVRVFTKICMPPRRRRTR*

>peptide 2 (42 aa)
IIKLQRQKTIQQKNEHRQITSKLTYSYLTAQMYQKLFAQNHT*

Sequence

>CNT30225503
AGATAATAAAACTGCAAAGGCAAAAAACAATTCAACAGAAAAATGAGCACAGGCAGATTACTTCAAAGTTGACTTATTCATACTTAACGGCACAGATGTA
CCAGAAACTGTTTGCACAAAACCACACATAAGGATGACTCGATGATCCATCAAACCAGACACAGTACGACTTCACTCAGACGAGACGACACTTGAACAAA
GAGGCACACCCACCGGACGACACACGGCAATTACTGACCACCACGGAGGCGGAGCACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCCGCAAGG
GTCCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGG
TGTCTGAGCTCTCCACCTCCAGAGTGATGGTCTTCCCAGTCAGGGTCTTCACGAAGATCTGCATGCCTCCCCGAAGGCGGAGGACAAGGTGAAGGGTGGA
CTCCTTCTGGATGTTGTAGTCAGCGAGGGTACGACCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCC
TGGATCTTGGCCTTGACGTTGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGC