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Detailed information on CNT30379461


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30417933Manihot esculentaPapaver somniferum23.036.999070reverse complement
CNT30704539Manihot esculentaPrunus avium79.2822.4881.74241reverse complement
CNT3030049Manihot esculentaTheobroma cacao25.3325.0890.9177forward

Expression of CNT30379461

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MVGFGLANFWLAHSKLGVEPWDSSEGLALLGS*

>peptide 2 (30 aa)
PSSVARACHPSGGYEVMGRCPSPDGWIRSG*

Sequence

>CNT30379461
GCCGAGCTCAGTAGCGCGGGCTTGTCACCCAAGTGGGGGCTATGAGGTGATGGGACGTTGTCCCAGCCCAGATGGTTGGATTCGGTCTGGCTAATTTCTG
GCTTGCCCATTCCAAGCTGGGAGTTGAACCATGGGACTCGAGCGAAGGTTTGGCTCTCCTGGGTTCCTAGAGCAGAGGGTACCGCGTTAGGCTGGCTTCA
CAGAGCAGCGACCACCTCTCGCTCCTGGCAGTGGAAGGATTACAGGCCGGTTGTCAAACGAGTCCGCATGGCCTGATGGGTTGCTTAATTGGACCATCAC
TTTT