Detailed information on CNT30311073


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30377550Camelina sativaArabidopsis thaliana17.4524.4592.5467forward
CNT30615676Camelina sativaSesamum indicum25.5223.2283.6798forward
CNT30653852Camelina sativaRosa chinensis30.737.8482.2118forward

Expression of CNT30311073

Peptides detected in this lncRNA

>peptide 1 (70 aa)
TGMHHFDGAASETKGHRPERSRTSKVHKIIDLGDHKFGRLGETRRRSGGGRRTRRRSGGGRRTRSGVGSR*

>peptide 2 (67 aa)
APVCIISTAQQARPKVIGQSDPVRAKFIRSSTLEITNSAALERPGGGAVVEGGPGGGAVVEGGPGLV*

>peptide 3 (37 aa)
MRKGREMEEMCGGEKPKRRRLRVEIGGGEGGAWRCCV*

Sequence

>CNT30311073
GCACCGGTATGCATCATTTCGACGGCGCAGCAAGCGAGACCAAAGGTCATAGGCCAGAGCGATCCCGTACGAGCAAAGTTCATAAGATCATCGACCTTGG
AGATCACAAATTCGGCCGCCTTGGAGAGACCAGGAGGAGGAGCGGTGGTGGAAGGAGGACCAGGAGGAGGAGCGGTGGTGGAAGGAGGACCAGGTCTGGT
GTAGGAAGTCGGTGATGCGGAAGGGGAGAGAGATGGAAGAGATGTGTGGAGGTGAGAAACCGAAACGGCGGCGGCTGCGCGTTGAGATTGGAGGAGGAGA
GGGAGGCGCGTGGCGGTGTTGCGTGTAATCATCGCCATCGAGAGAGATTTGTCTCTTTGAGTTTTTTTTTTGTTTGCTCTTTCG