Detailed information on CNT30361981


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30521812Sorghum bicolorSetaria italica27.1718.7786.89122forward
CNT30136588Sorghum bicolorLolium perenne17.5930.7489.8779forward
CNT30340303Sorghum bicolorEragrostis tef22.279.4390100forward

Expression of CNT30361981

Peptides detected in this lncRNA

>peptide 1 (67 aa)
MVMVLESDRKDMVVHGQAREGVLVDGRALRRRHGDRDGVRARAHGGQECRWWCRSTPIASVFLSVWH*

>peptide 2 (88 aa)
MGGRFAGATATATASVLVLMVAKSVGGGVDLPRSQACFCQFGTSFVLCTGRTCPGVPAGLWRFSPRLLVYQQRMPESPCPSHSTPHSS*

Sequence

>CNT30361981
GTACATGAACACCCACCCTGCGGTGGCGATGCAGGCGTAGAGGTAGAAGCTGCCGGCGATGGTGATGGTGTTGGAGAGCGATAGGAAGGACATGGTGGTG
CACGGGCAGGCGCGCGAAGGCGTACTTGTTGATGGGCGGGCGCTTCGCCGGCGCCACGGCGACCGCGACGGCGTCCGTGCTCGTGCTCATGGTGGCCAAG
AGTGTCGGTGGTGGTGTAGATCTACCCCGATCGCAAGCGTGTTTCTGTCAGTTTGGCACTAGCTTCGTTCTCTGTACCGGCCGTACGTGTCCTGGCGTGC
CGGCCGGACTCTGGCGGTTCTCTCCCCGATTATTGGTGTACCAGCAGCGAATGCCGGAGTCACCGTGTCCCTCTCACTCCACTCCTCACTCGTCCTAGCT
ACGTGAGGCAGGCAGGCAGGCAGGCCGAGTGGTCCGTGCGTGGTGTCTG