Detailed information on CNT30136588


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30361981Lolium perenneSorghum bicolor30.7417.5989.8779forward

Expression of CNT30136588

Peptides detected in this lncRNA

>peptide 1 (69 aa)
ARRAQAKAYLLMEGRFAGATATGTASASVLMAIDRFEDEAFVVSSEWAWQLHSSLLSASYDRNVLVCGK*

>peptide 2 (43 aa)
MRRLWSLANGRGSFTPHCSLLATIEMYWCVGNSLCTVYIRSCL*

>peptide 3 (35 aa)
EEGAGEGVLVDGRALRRRHGHRNGVRVRAHGDRSV*

Sequence

>CNT30136588
GCGAGGAGGGCGCAGGCGAAGGCGTACTTGTTGATGGAAGGGCGCTTCGCCGGCGCCACGGCCACCGGAACGGCGTCCGCGTCCGTGCTCATGGCGATCG
ATCGGTTTGAAGATGAGGCGTTTGTGGTCTCTAGCGAATGGGCGTGGCAGCTTCACTCCTCACTGCTCTCTGCTAGCTACGATCGAAATGTACTGGTGTG
TGGGAAATAGCTTGTGCACGGTTTATATAAGGAGCTGCCTGTGATCACTGAAGCAAA