Detailed information on CNT30700904


BLAST search results

BLAST vs Swiss-Prot:
sp|P45734|PALY_TRISU, E-value = 2e-20

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3069052Quercus lobataQuercus suber85.5682.2694.29385forward
CNT30355311Quercus lobataLactuca sativa17.7824.3283.7580forward

Expression of CNT30700904

Peptides detected in this lncRNA

>peptide 1 (37 aa)
RDSLMAMAATCDIVKVSPPSFTNGFLNSATMRFTSSK*

Sequence

>CNT30700904
CTCGTGACTCCCTCATGGCTATGGCAGCCACCTGTGATATCGTCAAGGTCTCACCTCCGAGCTTCACCAATGGCTTCCTGAACTCGGCCACCATGCGCTT
CACCTCGTCTAAATGAGACCCTTTGAGTGACTCAGCAGCCACGCCCCAACTCAGCGAGTCATGGCTAATGCAAAGACCACCCTCATCACTGCTTTTGTTA
ACATTGGTTCCCATGTCGACGAATGACCCAATTGAAAGAGAGAAATAATGGCAAGAAAAAAACTGAGTTTTTGGGGTTTGAATGAAAAATATAGGAAATC
TTGCTCACTAGCTTAGGCCCGTTTGTAAGGATTTCCTGGTTTGTGAAGAAGGGTTGTGAGGCTTAAATAGATGGCAACATGGCATTGGCATGGAGTTTTT
GAATTGTTAAGCGCTGTTTGGTGACGTTGTTCATTGTTGGTATTTTTAAG