Detailed information on CNT3069052


BLAST search results

BLAST vs Swiss-Prot:
sp|O64963|PAL1_PRUAV, E-value = 7e-34

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30700904Quercus suberQuercus lobata82.2685.5694.29385forward
CNT30355311Quercus suberLactuca sativa17.0924.3283.7580forward

Expression of CNT3069052

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MLSRTQSLLAFTPALFDSESSTSTRDSLMAIAATCDIVKVSPPSFTNGFLNSATMRFTSSK*

Sequence

>CNT3069052
ATAGCTATCCTTACCAGATTCCATGCTCTCCAGAACCCAGTCACTGCTAGCCTTCACGCCAGCCCTTTTTGACTCGGAAAGCTCCACCTCGACTCGTGAC
TCACTCATGGCTATCGCAGCCACCTGTGATATCGTCAAGGTCTCACCTCCGAGCTTCACCAATGGCTTCCTGAACTCGGCCACCATGCGCTTCACCTCGT
CTAAATGAGATCCTTTGAGTGACTCAGCAGCAACACCCCAACTCAGCGAGTCATGACTAATGCAAAGACTCGCCTCATCACTGCTTTTGTTAACATTGGT
TCCCATGACTAATGACCCAATTGAAAGAGAGAAATAATGGCAAGAAAAAACTGAGTTTTGGGGTTTGAAAAGTATAGGAAATCTTGCTCACTAGCTTAGG
CAGGTTTGTAAGGATTTCCTGGTTTGTGAAGAAGGGTTGTGAGGCTTAAATAGATGGCAACATGGCAT