Detailed information on CNT30351498


BLAST search results

BLAST vs Swiss-Prot:
sp|Q940H8|FRL4B_ARATH, E-value = 6e-30

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672118Eragrostis tefSetaria viridis83.7245.1788.49365forward
CNT30520218Eragrostis tefSetaria italica83.7240.4787.95365forward
CNT3013388Eragrostis tefZea mays97.0254.0284.16423forward

Expression of CNT30351498

Peptides detected in this lncRNA

>peptide 1 (65 aa)
MRLLAGPLLPPLEALDAAFFFSVLAFSSSSSCFRRSSRGNSASSLRSSTHFITARSADCSFLFTLL

>peptide 2 (30 aa)
MCGKGRPWRMMRGKGRMWRMMCGKESGQMW*

>peptide 3 (36 aa)
MLPFSSLSWPSPALQAASEDPPEETRLQAYGPQHTL*

Sequence

>CNT30351498
TGATGTGTGAGATGGGGAGGTTGTGGCATACGATGCATGGGTAGGGGAGGCCGTGGCATACGATGTGTGGGAAGGGGAGGCCGTGGCGTATGATGCGTGG
GAAGGGGAGGATGTGGCGTATGATGTGTGGGAAGGAGAGTGGGCAAATGTGGTAGGAGCTGGGAAAGAAGACACACAAGCATTGTTAGCGAGACGACCTG
CCTTAGCTGGAGGCATTGGACCCCCATTGCTTGCGCGAATGCGTTTATTAGCAGGGCCACTGCTTCCACCACTCGAAGCACTCGATGCTGCCTTTTTCTT
CTCTGTCTTGGCCTTCTCCAGCTCTTCAAGCTGCTTCCGAAGATCCTCCAGAGGAAACTCGGCTTCAAGCTTACGGTCCTCAACACACTTTATAACAGCT
CGCAGCGCTGACTGCTCTTTCTTATTCACATTGCTC