Detailed information on CNT30351493


BLAST search results

BLAST vs Swiss-Prot:
sp|Q940H8|FRL4B_ARATH, E-value = 8e-31

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30452255Eragrostis tefSaccharum spontaneum93.9542.5786.89450forward
CNT30362494Eragrostis tefSorghum bicolor97.2950.9885.19466forward
CNT30580685Eragrostis tefEchinochloa crusgalli82.4640.9387.85395forward
CNT30496079Eragrostis tefDigitaria exilis82.4644.5385.82395forward

Expression of CNT30351493

Peptides detected in this lncRNA

>peptide 1 (69 aa)
MRLLAGPLLPPLEALDAAFFFSVLAFSSSSSCFRRSSRGNSASSLRSSTHFITARSADCSFLFTLLCKMH

>peptide 2 (40 aa)
MCGKGRPWRMMRGKARLWYMMHGKGRMWRMMCGKESGQMW*

>peptide 3 (36 aa)
MLPFSSLSWPSPALQAASEDPPEETRLQAYGPQHTL*

Sequence

>CNT30351493
TGATGTGTGAGATGGGGAGGTTGTGGCATACGATGCATGGGTAGGGGAGGCCGTGGCATACGATGTGTGGGAAGGGGAGGCCGTGGCGTATGATGCGTGG
GAAGGCGAGGCTGTGGTATATGATGCATGGGAAGGGGAGGATGTGGCGTATGATGTGTGGGAAGGAGAGTGGGCAAATGTGGTAGGAGCTGGGAAAGAAG
ACACACAAGCATTGTTAGCGAGACGACCTGCCTTAGCTGGAGGCATTGGACCCCCATTGCTTGCGCGAATGCGTTTATTAGCAGGGCCACTGCTTCCACC
ACTCGAAGCACTCGATGCTGCCTTTTTCTTCTCTGTCTTGGCCTTCTCCAGCTCTTCAAGCTGCTTCCGAAGATCCTCCAGAGGAAACTCGGCTTCAAGC
TTACGGTCCTCAACACACTTTATAACAGCTCGCAGCGCTGACTGCTCTTTCTTATTCACATTGCTCTGCAAGATGCATA