Detailed information on CNT303496


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30555842Zea maysOryza glaberrima23.5317.2998.3360forward
CNT30496219Zea maysDigitaria exilis56.8664.1696.55145forward
CNT30556737Zea maysPanicum hallii57.6531.8997.28147forward

Expression of CNT303496

Peptides detected in this lncRNA

>peptide 1 (78 aa)
QQPNHAKKNVAHSYAMRVDSVDLEDGGVARVGEHGEASVLDLLGAQLLDLLRRAAAPAERVKPEATRVPFISTQMNNC*

>peptide 2 (70 aa)
SNQIMQKKMWRIHMQCGLIQLTWKMVAWPGSASMARRPFLISLVRSSLIFSGEPLPQPSGSNQRPPGYLS*

Sequence

>CNT303496
TCAGCAACCAAATCATGCAAAAAAAAATGTGGCGCATTCATATGCAATGCGGGTTGATTCAGTTGACCTGGAAGATGGTGGCGTGGCCAGGGTCGGCGAG
CATGGCGAGGCGTCCGTTCTTGATCTCCTTGGTGCGCAGCTCCTTGATCTTCTCCGGCGAGCCGCTGCCCCAGCCGAGCGGGTCAAACCAGAGGCCACCA
GGGTACCTTTCATAAGCACACAGATGAATAATTGTTAGCCTTCGGCAAGGACTAC