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Detailed information on CNT30346179


BLAST search results

BLAST vs Swiss-Prot:
sp|P69310|UBIQ_AVESA, E-value = 3e-40

BLAST vs NONCODE:
NONSTUT000620, E-value = 2e-27

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30299368Eragrostis tefTriticum aestivum44.1150.7592.8236forward
CNT30256779Eragrostis tefAvena sativa43.9313.6695.32235forward
CNT30666113Eragrostis tefTriticum dicoccoides44.1146.9293.22236forward

Expression of CNT30346179

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MRRCWSGGIPSLSWILALTLSMVSEDSTSRVMVLPVRVLTKIC

>peptide 2 (64 aa)
MIWTHHHHHRVDQRDHTCEPRTTAAPGRGLTGHHGDEAPGGGWTPSGCCSQRGCGHPQAASQRR*

Sequence

>CNT30346179
GTAGCAGTATCGAGGGCAGAATAAACTGCAAAATCTAAGGACAGATTAAACTGTAAAATCAAGAAGCACGAAGTGACAGCAGAATTCACACGAAGTTCAG
GGTTCACTTATTCATCACCGTTAACAAGCTGCAGCACCGCAGCAAGTGTTTCACAAGCACAAACCAACGACACAGGACTCACAATAACACGACAGACATC
ATTCAACCAACACATGATCTGGACACACCATCACCACCATCGGGTAGACCAGAGAGACCATACTTGTGAACCCAGGACAACAGCAGCTCCTGGCCGAGGA
CTTACTGGCCACCACGGAGACGAAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCATCCTCAAGCTGCTTCCCAGC
GAAGATGAGACGCTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCCGAGGACTCCACCTCGAGGGTGATG
GTCTTGCCGGTGAGGGTCTTAACAAAGATCTGCAT