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Detailed information on CNT30345515


BLAST search results

BLAST vs Swiss-Prot:
sp|P12329|CB21_MAIZE, E-value = 2e-136

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30250555Eragrostis tefAvena sativa70.3259.0588.27597forward
CNT30666199Eragrostis tefTriticum dicoccoides70.796391.35601forward
CNT3010578Eragrostis tefZea mays54.8975.495.28466forward
CNT30685729Eragrostis tefTriticum urartu70.7961.291.51601forward

Expression of CNT30345515

Peptides detected in this lncRNA

>peptide 1 (73 aa)
IESFIRPIQNMSTNTHYWYNLPSACSILQYSYTHRYNSTYEYVRRLRYTRHPSFTLLLTCRGRSWWRRTMRCC*

Sequence

>CNT30345515
ATTGAGTCATTCATCAGGCCCATCCAGAACATGAGCACAAATACACACTACTGGTACAATCTCCCATCGGCGTGCTCCATTTTACAGTACTCGTACACCC
ACAGGTACAATAGTACATACGAATACGTACGTCGACTACGGTACACACGACATCCCAGCTTCACCTTGCTGCTCACTTGCCGGGGACGAAGTTGGTGGCG
TAGGACCATGCGTTGTTGTTGACGGGGTCGGCGAGGTGGTCAGCGAGGCGGCCGTTCTTGATCTCCTTCACCTTGAGCTCGGCGAAGGCCTCCGGGTCGT
CGGCGAGGCCCAGCGGGTCGAAGCTGCCGCCTGGGTAGAGCGGGTCGACGACCTCGCCGAGCGGGCCGCCGGCGACGCGGTATCCCTCGACGGCGCCCAT
GAGCACGACCTGGCAGGCCCAGATGGCGAGGATGCTCTGCGCGTGGATCAGGCTCGGGTTGCCGAGGTAGTCCAGCCCGCCCTCGCTGAAGATCTGGGAC
CCGGCCTTGAACCACACGGCCTCGCCGAACTTGACGCCGTTGCGGGCCAGCAGCTCGGGGAAGACGCAGCCCAGCGCGCCCAGCATGGCCCACCGGCAGT
GGATCACCTCCAGCTCCCGGTTCTTGGCGAAGGTCTCGGGGTAGCTCGGGGGCTCGCCGGAGAAGGGGCCCAGGTACTTGACGCGGTCGGGGCCGTACCA
CGGGCTGCCGGACGCCGCCACCTTGGGCTTGGCCGCGGTCTTGCGCATGGTGATGCGGGCCTCGCCGAAGGCGCCCACCTTGATGGGGGCAGCCATTGCT
GATCGAGCGTGAGCTGATGAGAGAGTGTGCTAGCTAGCTGTGCGATGAG