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Detailed information on CNT30666199


BLAST search results

BLAST vs Swiss-Prot:
sp|P12329|CB21_MAIZE, E-value = 9e-126

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30395272Triticum dicoccoidesTriticum turgidum92.9893.8697.97887forward
CNT30250555Triticum dicoccoidesAvena sativa69.0865.1892.72659forward
CNT30685729Triticum dicoccoidesTriticum urartu94.2391.5598899forward
CNT30345515Triticum dicoccoidesEragrostis tef6370.7991.35601forward
CNT30369260Triticum dicoccoidesOryza glumipatula54.9351.7388.93524forward
CNT30574779Triticum dicoccoidesOryza barthii61.7473.0888.46589forward
CNT30117539Triticum dicoccoidesOryza nivara62.2650.388.55594forward

Expression of CNT30666199

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MQHLSVRTTQSHNGKKQRSTTTHMQQHPSAMKLSA*

>peptide 2 (37 aa)
MVMRPSPKGAALEAFTGVPAIAGEESAMVAAAIANFE*

Sequence

>CNT30666199
TTAAGCAGAAGAACAGAGATGCCTTGATTAATCTGAGAAAATAGCCAGATATTACACAAACACCATCTTGTAGTGTACACACACCAACTCCTCATCTCGA
CTCGCGCTCACATGCAACATCTATCAGTCCGGACTACTCAATCTCACAACGGGAAGAAGCAGAGATCGACGACGACACACATGCAGCAGCATCCATCAGC
CATGAAGTTGTCGGCCTAGAGGTTGAGCTGACCGCGCTCACTTGCCGGGGACGAAGTTGGTGGCGAAGGCCCAGGCGTTGTTGTTGACGGGGTCGGCGAG
GTGGTCGGCGAGGCGGCCGTTCTTGATCTCCTTCACCTTGAGCTCCGCGAACGCCTCGGGGTCCTCGGCGAGGCCCAGGGGGTCGAAGCTGCCGCCGGGG
TAGAGCGGGTCCACGATCTCGCCGAGCGGGCCGCCGGCGACGCGGTAGCCCTCCACGGCGCCCATGAGCACCACCTGGCAGGCCCAGATGGCGAGGATGC
TCTGCGCGTGCACCAGGCTGGGGTTGCCGAGGTAGTCGAGGCCGCCCTCGCTGAAGATCTGGGAGCCGGCCTTGAACCACACGGCCTCGCCGAACTTGAC
GCCGTTGCGGGCGAGCAGCTCCGGGAAGACGCAGCCGAGCGCGCCGAGCATGGCCCAGCGGCAGTGGATCACCTCCAGCTCCCGGTTCTTGGCGAAGGTC
TCGGGGTCGGCGGAGAGCGGGCCGAGGTAGAGCACGCGGTCGGAGCCGTACCACGGGCTGCTGGACGCCGCCACCTTGGGCTTGCCCGCCGTCTTGCGCA
TGGTGATGCGGCCCTCCCCGAAGGGCGCCGCCCTGGAGGCCTTCACCGGGGTGCCGGCCATCGCCGGGGAGGAGAGCGCCATGGTCGCGGCCGCCATTGC
TAACTTCGAGTGAGCTGAGGCTGACAGTAGGAGGCGCTGGTGGTCGTTGGTGAC