Detailed information on CNT30328631


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FNB0|CHLH_ARATH, E-value = 8e-41

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30133288Asparagus officinalisLolium perenne30.8910.7385.5376forward
CNT30426485Asparagus officinalisPapaver somniferum27.644.1189.7168forward
CNT30603839Asparagus officinalisOryza punctata30.084.5386.4974forward

Expression of CNT30328631

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MTISARLTASNPCKAPHSPLVESGCRESKHRSSRPVSQA*

Sequence

>CNT30328631
TGATGATGGAGCTAACAATCTGAGGTCCCCGACCGGAATCCTTCAGTGACTGATATGACGATATCAGCTCGGCTAACTGCTTCAAACCCTTGTAAAGCCC
CGCATTCTCCGCTGGTGGAGTCAGGCTGTCGGGAAAGCAAGCATCGCTCATCCCGACCTGTTTCCCAGGCATGAACTCAAGTGACCCGTGGGTCCCAAAA
TGGAGGACAGCGTCCGCGCCAAAGATCTTCTCGACGAACGAGTAAT