Detailed information on CNT30313432


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SJY5|PUMP5_ARATH, E-value = 1e-23

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30728471Camelina sativaCorchorus capsularis53.857.8781.51119forward
CNT30607892Camelina sativaGossypium raimondii58.3712.3180.62129forward
CNT30726070Camelina sativaLupinus angustifolius28.968.1785.9464forward

Expression of CNT30313432

Peptides detected in this lncRNA

>peptide 1 (72 aa)
IIIKFSTFLNQKSKSLNSLRTCSSVTNRTTVNGACLETVGTNPLYKAIIPSAFTVFNAQSTGLEATLATNPAA

>peptide 2 (45 aa)
HHHQIFNFFESKVKVFKQLANLFKRNKQNNRERCLSRNSRHKPFI*

Sequence

>CNT30313432
CATCATCATCAAATTTTCAACTTTTTTGAATCAAAAGTCAAAGTCTTTAAACAGCTTGCGAACTTGTTCAAGCGTAACAAACAGAACAACCGTGAACGGT
GCTTGTCTCGAAACAGTCGGCACAAACCCTTTATATAAAGCCATAATCCCTTCAGCCTTCACCGTCTTCAACGCACAATCAACCGGGTTAGAAGCAACGC
TCGCCACAAACCCCGCAGCGA