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Detailed information on CNT30726070


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30313432Lupinus angustifoliusCamelina sativa8.1728.9685.9464forward
CNT3050712Lupinus angustifoliusCucumis sativus16.9964.2584.96133forward

Expression of CNT30726070

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MDNKTQGCFSFITINIRKNTKARNLLYGK*

>peptide 2 (71 aa)
MFITLVLITSTGLVKRVSGTSSNDGSDASFSKTFETHNRSCNKVINFERMNRIEGNRNFGLLEKKGLVNVG*

Sequence

>CNT30726070
ATTACTGCTTATTTTAAATTAAAAATCTGGACAAAATAATTTCGGAAATGGAATGAACTTCTCTTATTCAAGTAGATAATGGATAACAAAACACAAGGTT
GCTTCTCATTCATAACGATAAATATAAGGAAAAATACGAAAGCAAGAAATCTTCTTTATGGAAAATGAAAGATCTTCGTCATCATCTTAGAAATCCTTTA
ACAGCTTGCGAACTTGTTCCAGAGTCACAAACAGCACAACAGTGAAGGGTCCCTGCCTCGAAATCGTAGGAATAAATCCTTTGTAAAGGGCCATAGGACC
TTCAGCACGCACAGTCTTCAAAGCACAATCCATAGCACCAGAATACGGTGGCTCCGCCCCAGGCTCCACCCTCATGTTCATAACCCTAGTCTTGATCACA
TCCACCGGGTTGGTCAAGAGGGTGAGTGGAACATCCAGCAATGATGGAAGCGATGCCTCCTTCAGCAAAACCTTTGAGACCCATAATAGATCTTGCAATA
AAGTTATAAACTTTGAAAGAATGAATAGAATTGAAGGTAATAGAAATTTTGGTTTGTTAGAGAAGAAAGGGTTAGTTAATGTAGGTTAATGAAAAAAGAT
AGAAGAGGACCAGTTGGAATTAGAGGTCATTTCACTTGAGACCAAGAGATGGGAATGAAGGCCACAAGCTATGGAAGAAGAGTGGGGAACAGTAGCCCTC
TGAGACATAGGCTAGTAGCCGAAAGCAATGAATGAGGAAGAGTTATTTGGTGTGGGAAGAAAGAAGATTGGGGAGAGGATTTT