Detailed information on CNT30615676


BLAST search results

BLAST vs Swiss-Prot:
sp|P42027|NDUS7_BRAOL, E-value = 6e-34

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30311073Sesamum indicumCamelina sativa27.4930.2182.76116forward

Expression of CNT30615676

Peptides detected in this lncRNA

>peptide 1 (71 aa)
GPENDSESIQIVAGSPRVHHLHGAAGQTKGHGPDGAAASPVHEIIDLRDHVLRRLGYASWGGGGWWRGGGG*

>peptide 2 (61 aa)
MVEGRRRMSRQGKGWWCELRRGRSGNGVAPFEGVSGRRFWLAEPFSLFLFCPGLREKGGWL*

>peptide 3 (50 aa)
MGQMEPRRAQFMRSSTFEITYSAALDMPAGEEVDGGGAEEDEPAREGMVV*

Sequence

>CNT30615676
CTGGGCCTGAAAATGATTCCGAATCGATCCAAATCGTAGCGGGCAGCCCCCGTGTGCATCATCTCCACGGCGCAGCAGGCCAGACCAAAGGTCATGGGCC
AGATGGAGCCGCGGCGAGCCCAGTTCATGAGATCATCGACCTTCGAGATCACGTACTCCGCCGCCTTGGATATGCCAGCTGGGGAGGAGGTGGATGGTGG
AGGGGCGGAGGAGGATGAGCCGGCAAGGGAAGGGATGGTGGTGTGAATTGAGGCGAGGGAGGAGCGGTAATGGTGTGGCGCCGTTTGAGGGAGTATCCGG
GCGGCGTTTCTGGCTAGCTGAGCCATTTTCTCTTTTTCTCTTCTGTCCAGGACTTAGGGAGAAAGGGGGCTGGCTTTGAGCAGGGCGGATTGTGGAGACT
GGAGAGTCGCGTTGTCGTTGAG