Detailed information on CNT3031005


BLAST search results

BLAST vs Swiss-Prot:
sp|Q43191|LOX15_SOLTU, E-value = 5e-90

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30631678Theobroma cacaoVigna unguiculata20.3925.3385.09114forward
CNT30709697Theobroma cacaoGlycine max22.925.184.38128forward
CNT3095860Theobroma cacaoSolanum tuberosum25.0413.4985.71140forward
CNT3087387Theobroma cacaoVigna radiata20.396.9483.33114forward
CNT30620387Theobroma cacaoCajanus cajan23.7918.8186.47133forward
CNT30704118Theobroma cacaoPrunus avium64.0444.284.08358forward

Expression of CNT3031005

Peptides detected in this lncRNA

>peptide 1 (77 aa)
MAHLSCHHDPPLGVPSTRLEPQGPVEPFHPSYIRRSNSLSPIFQWQTRFSTHQQHMDSLLSVVEDHVGNLHHQLQFL*

>peptide 2 (87 aa)
MESRSNPYDNGARFYQLFTSLHFRPPWLIFLVTMTHLSEFLPPGLNLRVLLNHFIRLILEGAIVSHPFFNGKPDFQPINSIWIVFYQ*

>peptide 3 (59 aa)
DACLDRTSTTDMLMKVCSCEVIVLKKTFSGFFSSSAYSGVPFSGMSLRLSVGRFGEKPA*

Sequence

>CNT3031005
CTGATGCGTGCCTTGACAGAACTTCTACCACGGACATGCTAATGAAGGTTTGTAGCTGCGAAGTAATTGTTCTGAAGAAAACCTTCTCGGGGTTTTTCTC
AAGTTCAGCATATTCAGGAGTGCCTTTCTCAGGCATGAGCCTGCGGCTTAGTGTTGGACGGTTTGGGGAGAAGCCTGCATAGGCGAATTGTCCGAAGTTG
ACAGCTGCATGGAGAGCAGAAGCAATCCATATGATAATGGTGCAAGATTCTATCAGCTCTTCACGAGTTTGCATTTTAGGCCACCATGGCTCATCTTTCT
TGTCACCATGACCCACCTCTCGGAGTTCCTTCCACCAGGCTTGAACCTCAGGGTCCTGTTGAACCATTTCATCCGTCTTATATTAGAAGGAGCAATAGTC
TCTCACCCATTTTTCAATGGCAAACCAGATTTTCAACCCATCAACAGCATATGGATAGTCTTCTATCAGTAGTCGAAGACCATGTAGGGAATTTGCATCA
TCAACTGCAATTCCTCTGAATATATATAGAAAATAGAAGACAGTCGATGTCATTTCCAT