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Detailed information on CNT30631678


BLAST search results

BLAST vs Swiss-Prot:
sp|P27480|LOXA_PHAVU, E-value = 2e-74

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30526543Vigna unguiculataPhaseolus vulgaris7896.4394.87351forward
CNT30709440Vigna unguiculataGlycine max91.7852.6892.25413forward
CNT3087387Vigna unguiculataVigna radiata66.4418.282.61299forward
CNT3031005Vigna unguiculataTheobroma cacao25.3320.3985.09114forward
CNT30176589Vigna unguiculataVigna angularis20.6733.9496.7793forward

Expression of CNT30631678

Peptides detected in this lncRNA

>peptide 1 (34 aa)
SNLDCPSVQGRPHQKHVLTVSLSPKGPQGPHIFL*

Sequence

>CNT30631678
GTCCAATTTGGATTGTCCCTCTGTCCAAGGTAGACCTCATCAGAAGCATGTCTTGACAGTATCTCTATCACCGAAAGGTCCACAAGGGCCTCATATTTTC
CTGTAATTGTTCTCAGATAAGCCTTTTGATGATTGCTGCTTAACTCATCATATTCTTTGGTTCCTGGCTCAGGGAGCAATCTTCTGGTTAAAGTTGGACG
GTTTAGGATGTAACCTCCATAAGGGTACTGTCCAAAATTAACAGCTGCATGGAGAGCTGAAGCAATCCATATGATAATGCTGCAAATGTGAATCAGATCT
TGAAGAGTGTTCAACTTAGGCCACCATGGCTTATCTTTCAAGTCACCATGACCCTTCTCAACAGCTTCCTTCCACCAAGTTTGGAGTTCTGTGTCTTTCT
TAATTGCATCATCTGTGGCATAGTACAATGAGACATAGTCTTTAACCCAT