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Detailed information on CNT30669183


BLAST search results

BLAST vs Swiss-Prot:
sp|P10707|CB2D_SOLLC, E-value = 7e-78

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30192472Triticum dicoccoidesSecale cereale79.0679.5893.1725forward
CNT30307765Triticum dicoccoidesTriticum aestivum43.7360.2197.01401forward

Expression of CNT30669183

Peptides detected in this lncRNA

>peptide 1 (69 aa)
MCLLAGHKVGGEGPRVVVDGVGEVVSEVLKRTLTGDDGLHKVSKHGEHCKAAVLDLLHLELGKRLWIVS*

>peptide 2 (43 aa)
MACTKYPNMENIARRPFLISFTLSSANASGSSARPRGSKLPPG*

>peptide 3 (39 aa)
MVTRPPPSAYEAPASLIAGEESAIVVEAAIAAGWNRASC*

>peptide 4 (30 aa)
SRWALFVNIFDSVQHQRSDINHTSRAHIYS*

>peptide 5 (29 aa)
MAQRQWITSSSRFLAKVSGSAERPAVSHP*

Sequence

>CNT30669183
GTTCCAGATGGGCGCTATTTGTAAACATCTTTGATAGTGTACAACATCAACGATCAGATATTAATCATACATCCAGAGCACACATATACTCCTGAGAAGT
CGATTTTCATGTGTTTACTTGCCGGGCACAAAGTTGGTGGCGAAGGCCCACGCGTTGTTGTTGACGGGGTCGGCGAGGTGGTCAGCGAGGTTCTCAAGCG
GACCCTTACCGGTGACGATGGCCTGCACAAAGTATCCAAACATGGAGAACATTGCAAGGCGGCCGTTCTTGATCTCCTTCACCTTGAGCTCGGCAAACGC
CTCTGGATCGTCAGCTAGGCCAAGGGGGTCGAAGCTGCCACCGGGGTAGAGTGGGTCGACGATCTCTCCGAGCGGGCCACCAGCAACGCGGTACCCCTCG
ACAGCGCCCATGAGCACGACCTGGCAAGCCCAGATGGCAAGGATGCTCTGAGCGTGGACCAAGCTAGGCCGGCCTTGAACCAGACGGCCTCGCCGAACTT
GACGCCGTTGCGGGCGAGCAGCTCGGGGAAGACGCAGCCGAGCGCGCCGAGCATGGCCCAGCGGCAGTGGATCACCTCGAGCTCGCGGTTCTTGGCGAAG
GTCTCCGGGTCGGCGGAGAGGCCCGCGGTGTCCCACCCGTAGTCGCCCGGGAACTCGCCGCTGAGGTAGCTCGGGGGCTCGCCAGAGAGCGGGCCGAGGT
AGAGCACGCGGTCGGGGCCGTACCAGGGGCTGTTGGAGGCGGCGGCCTTGGGCGCGGCCTTGCGCATGGTGACGCGGCCGCCGCCGAGCGCGTACGAGGC
TCCGGCGAGCTTGATCGCGGGGGAGGAGAGCGCCATTGTGGTGGAGGCCGCCATTGCTGCCGGATGGAACAGAGCAAGCTGCTGATGTGCGGCTGCCGCT
GCTACTGATGGCTGCGT