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Detailed information on CNT30301639


BLAST search results

BLAST vs Swiss-Prot:
sp|P69326|UBIQ_WHEAT, E-value = 7e-48

BLAST vs NONCODE:
NONSTUT000620, E-value = 5e-19

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30395491Triticum aestivumTriticum turgidum94.0799.8100492forward
CNT30666357Triticum aestivumTriticum dicoccoides99.8162.6796.93522forward
CNT30686462Triticum aestivumTriticum urartu99.6227.9598.27521forward

Expression of CNT30301639

Peptides detected in this lncRNA

>peptide 1 (44 aa)
QIKTASKQLKHNIQNQQQIRAISEVHLFITYNDTDVPATVSTNR*

>peptide 2 (56 aa)
MILMCQQRFQPTDSSLNQRSRTDTGIRQFSNQHSRTHTNEKTVLLNDRAPPTGRPG*

>peptide 3 (41 aa)
MRRCWSGGMPSLSWILALTLSMVSELSTSRVMVLPVRVFTKI

Sequence

>CNT30301639
GCCAGATCAAAACTGCAAGCAAGCAATTGAAGCACAATATACAAAACCAACAGCAAATAAGAGCAATATCTGAAGTTCACTTATTCATTACTTATAATGA
TACTGATGTGCCAGCAACGGTTTCAACCAACAGATAGTTCACTAAACCAACGCAGTAGGACTGACACGGGGATTCGACAGTTTTCAAACCAACACAGTAG
GACTCACACGAACGAGAAAACAGTTCTACTGAACGACAGGGCACCGCCCACCGGACGACCAGGATAAACCAGCAGCTCAAACGACAGGGCAATTACTGAC
CACCGCGAAGACGGAGTACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTACGGCCATCCTCCAGCTGCTTGCCAGCGAAGATGAG
ACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCTATGGTGTCGGAGCTCTCAACCTCTAGGGTGATGGTCTTGCCA
GTGAGGGTCTTCACAAAGATCTG