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Detailed information on CNT30395491


BLAST search results

BLAST vs Swiss-Prot:
sp|P69326|UBIQ_WHEAT, E-value = 5e-48

BLAST vs NONCODE:
NONSTUT000620, E-value = 1e-19

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30301639Triticum turgidumTriticum aestivum99.894.07100492forward
CNT30364386Triticum turgidumSorghum bicolor47.0644.0292.24232forward

Expression of CNT30395491

Peptides detected in this lncRNA

>peptide 1 (34 aa)
HNIQNQQQIRAISEVHLFITYNDTDVPATVSTNR*

>peptide 2 (42 aa)
MRRCWSGGMPSLSWILALTLSMVSELSTSRVMVLPVRVFTKIC

>peptide 3 (56 aa)
MILMCQQRFQPTDSSLNQRSRTDTGIRQFSNQHSRTHTNEKTVLLNDRAPPTGRPG*

Sequence

>CNT30395491
GCACAATATACAAAACCAACAGCAAATAAGAGCAATATCTGAAGTTCACTTATTCATTACTTATAATGATACTGATGTGCCAGCAACGGTTTCAACCAAC
AGATAGTTCACTAAACCAACGCAGTAGGACTGACACGGGGATTCGACAGTTTTCAAACCAACACAGTAGGACTCACACGAACGAGAAAACAGTTCTACTG
AACGACAGGGCACCGCCCACCGGACGACCAGGATAAACCAGCAGCTCAAACGACAGGGCAATTACTGACCACCGCGAAGACGGAGTACCAGGTGGAGGGT
GGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTACGGCCATCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTG
TCCTGGATCTTGGCCTTGACGTTGTCTATGGTGTCGGAGCTCTCAACCTCTAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGC