Detailed information on CNT30686462


BLAST search results

BLAST vs Swiss-Prot:
sp|P69326|UBIQ_WHEAT, E-value = 3e-44

BLAST vs NONCODE:
NONSTUT000620, E-value = 1e-22

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30301639Triticum urartuTriticum aestivum27.9599.6298.27521forward
CNT30396078Triticum urartuTriticum turgidum39.739.0797.57740forward
CNT30364386Triticum urartuSorghum bicolor12.6644.7893.64236forward
CNT30495775Triticum urartuDigitaria exilis12.8845.1192.92240forward

Expression of CNT30686462

Peptides detected in this lncRNA

>peptide 1 (44 aa)
QIKTASKQLKHNIQNQQQIRAISEVHLFITYNDTDVPATVSTNR*

>peptide 2 (53 aa)
MCQQRFQPTDSSLNQRSRTDTGIRQFSNQHSRTHTNEKTVLLNDRAPPTGRPG*

>peptide 3 (30 aa)
MIQHSCRTCLSYRERSLAFSGEINLQSYAY*

>peptide 4 (30 aa)
MLIIQRKKPSFLRGNQSTILRLLGRSRYRI*

>peptide 5 (53 aa)
MRRCWSGGMPSLSWILALTLSMVSELSTSRVMVLPVRVFTKICICREEYQTEW*

>peptide 6 (30 aa)
MLIIQGKKTSFLRGNQSTILRLLGRSRYRI*

>peptide 7 (30 aa)
MSTRDTSGSASGETELPPTRLIQNSTKTKS*

>peptide 8 (43 aa)
MRERIGQQISFPQHQIGAETDQIPQYYTSIQPYNQRRSRRHGER

>peptide 9 (39 aa)
MHTRLYTAKGVDLNYKQIYVVENKQTAATYFSHYLNDPT*

>peptide 10 (29 aa)
MVDNKQTAAAYFNQMHQKNLKTIYLKDST*

Sequence

>CNT30686462
CAGATCAAAACTGCAAGCAAGCAATTGAAGCACAATATACAAAACCAACAGCAAATAAGAGCAATATCTGAAGTTCACTTATTCATTACTTATAACGATA
CTGATGTGCCAGCAACGGTTTCAACCAACAGATAGTTCACTAAACCAACGCAGTAGGACTGACACGGGGATTCGACAGTTTTCAAACCAACACAGTAGGA
CTCACACGAACGAGAAAACAGTTCTACTGAACGACAGGGCACCGCCCACCGGACGACCAGGATAAACCAGCAGGTCAAACGACAGGGCAATTACTGACCA
CCGCGAAGACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTACGGCCATCCTCCAGCTGCTTGCCAGCGAAGATGAGAC
GCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCCACCTCAAGAGTGATGGTCTTGCCGGT
GAGGGTCTTCACAAAGATCTGCATCTGCAGAGAAGAATACCAAACAGAATGGTAAGCCTCAAGAAGCAAACTGATATGATGAAGACTACTACATAAATAA
GATTCCATACATCACATCATAGTGAATATAAACAAACGGCAGTAGCCATATACTTCCTCCGTCCGGAAATACTTGTCATCAAAATAGATAAAAGGGGATG
TATCTAGACGTATTTTAGTATTTAGGTGCATGCTCATAACCATAAAAAAACTAAAGATTGTTATTCCATGGAGCTGTCAGACATGCTTATATCATCCAAG
GGAAGAAGCCTAGGTTTTTTCCGAGAAAAGTCAATCTACAGATGGTAGATAATAAACAAACGGCAGCAGCATATTTTAATCAGATGCACCAGAAGAATCT
AAAGACCATTTATCTCAAGGATTCCACATAGCTGCCGGACATGCTTATCATCCAAGGAAAAAAGACTAGCTTTCTTAGGGGAAATCAATCTACAATCCTA
CGCCTATTAGGAAGGTCACGGTACAGAATATGAGCACGCGCGACACATCAGGCAGTGCTTCTGGAGAGACAGAATTACCACCCACAAGGCTAATACAGAA
TTCGACCAAAACAAAGAGCTAAACGAATCTATCGCGAAGGAGCGGACGAACCAGTACACAAATCATGCATACGAGACTATATACGGCTAAAGGAGTTGAC
CTCAACTACAAACAGATCTATGTGGTAGAGAATAAACAAACGGCAGCAACATATTTTTCTCACTATCTCAATGATCCAACATAGAGAAGTCTGTTAGCTT
TTTCCGAGAAGCTAACAGACTGTCGCGCAGATGCACCAAAAGAAAAATCTAAAGACCATTTATCTCAATGATCCAACATAGCTGCCGGACATGCTTATCA
TACAGAGAAAGAAGCCTAGCTTTCTCAGGGGAAATCAATCTACAATCCTACGCCTATTAGGAAGGTCTCGGTACAGAATATGAGCACGAGCAACACATCA
AGCAGTATAGGAGCGCCTGGAGAGAGAATTACGACAAAAAGCTAATATTGAATTCGACCATAATAAAGAGTTAAAGACGTATCTATCACATAGGAGCGGA
CGAACCAGTACATAAATCATGCGTATGAGACTATACGGCTTAAAGAGTTGACCTCGAACACGAACAGATCTACCCCTTCAATCTACACGCAAAAATCCCT
AAGAATTCGCCGAAGCTTCATCGACCTAACATGCGCGAACGGATCGGACAACAAATTTCGTTCCCACAGCATCAGATCGGAGCAGAAACCGACCAAATTC
CACAATACTACACCTCCATCCAACCATATAATCAACGCCGATCTAGACGACACGGGGAGAGGGG