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Detailed information on CNT30297476


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30439638Triticum aestivumAegilops tauschii10010099.34305forward
CNT3059713Triticum aestivumArabidopsis lyrata22.6222.4886.9669forward
CNT3066721Triticum aestivumLeersia perrieri41.9740.8990.62128forward

Expression of CNT30297476

Peptides detected in this lncRNA

>peptide 1 (30 aa)
RAQSRELVTQVGALRWCWMFGVDSGPGLVL*

>peptide 2 (46 aa)
PSSVTRACHPGGGVKVVLDVWCGLWTWACVVTLLACPVQVGSGLWC*

Sequence

>CNT30297476
GCCGAGCTCAGTCACGAGAGCTTGTCACCCAGGTGGGGGCGTTAAGGTGGTGTTGGATGTTTGGTGTGGACTCTGGACCTGGGCTTGTGTTGTAACATTG
CTGGCTTGCCCGGTCCAAGTTGGTAGTGGGCTGTGGTGCTGATGCGAAAGCTTCGGCCTCTCAGTCCTTGAAGTGGCAGGCACCGCGTTAGGCTGGTTTC
ACAGAGCAGCGCTCACTGTCCTCTTCCAACGGTGGAAGGATAACAGGCCGCTGCACCATGGGCCCGCTCTGGTTTAGAATCCTTCCATAACAGACCACCA
TCTTT