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Detailed information on CNT30290543


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9XF88|CB4B_ARATH, E-value = 6e-19

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672091Triticum aestivumSetaria viridis40.3438.5784.43167forward
CNT30436081Triticum aestivumAegilops tauschii67.8754.9999.64281forward
CNT30659570Triticum aestivumTriticum dicoccoides104.1178.6593.74431forward

Expression of CNT30290543

Peptides detected in this lncRNA

>peptide 1 (70 aa)
CIKLPLVHILQITKSQQLSYVIRPALINKGSVRYPLIHHSSYKTKARSLHGRAFVHFAAELTEIARPPTT*

Sequence

>CNT30290543
TGCATTAAGTTACCATTGGTTCATATTTTACAAATCACCAAGTCCCAGCAGCTCTCCTATGTGATCAGACCTGCATTAATCAACAAAGGATCTGTGCGAT
ACCCTCTCATCCATCACTCGTCATACAAAACCAAAGCACGTTCGTTACACGGACGCGCGTTCGTCCATTTTGCTGCTGAGCTGACAGAAATTGCTCGACC
ACCGACCACTTAAGAGGAACCCAAGGTGTCGAAGATGGTGGTGTGCAGCGGGTCGCTGAGGTGGGTGGCCCAGTTGTTGAGAGGCGGGCGTGCTTGATCT
CCGCCAGCTGCAGAGTCTCCTTCTTCTCCGGGTCCGCCGCGAGCCCCAGCGGGTCGAAGTAGGAGCCACCGGGGTAGAGCCTCCTCTCCGGGTCCAGCTC
CGCGTTGCGCTGGA