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Detailed information on CNT30436081


BLAST search results

BLAST vs Swiss-Prot:
sp|Q07473|CB4A_ARATH, E-value = 5e-54

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695032Aegilops tauschiiOryza sativa42.0732.6391.16215forward
CNT30672091Aegilops tauschiiSetaria viridis35.4241.885.64181forward
CNT30520570Aegilops tauschiiSetaria italica42.0721.9889.3215forward
CNT30640553Aegilops tauschiiNymphaea colorata34.4421.8685.8176forward
CNT30526506Aegilops tauschiiPhaseolus vulgaris37.1816.0380190forward
CNT30485914Aegilops tauschiiOlea europaea32.0920.4779.27164forward
CNT30708177Aegilops tauschiiGlycine max37.1818.0682.11190forward
CNT30179479Aegilops tauschiiSecale cereale45.0133.2494.78230forward
CNT30290543Aegilops tauschiiTriticum aestivum54.9967.8799.64281forward
CNT30221194Aegilops tauschiiHordeum vulgare47.5547.0995.88243forward
CNT30387400Aegilops tauschiiTriticum turgidum51.0851.9997.7261forward
CNT30562751Aegilops tauschiiActinidia chinensis28.5735.182.88146forward
CNT30587569Aegilops tauschiiMusa acuminata20.1630.7587.38103forward
CNT30554457Aegilops tauschiiOryza glaberrima42.0717.991.16215forward
CNT30243897Aegilops tauschiiAvena sativa58.967.0494.35301forward
CNT30659570Aegilops tauschiiTriticum dicoccoides10093.2595.89511forward
CNT30453511Aegilops tauschiiSaccharum spontaneum41.6840.4289.67213forward
CNT30133575Aegilops tauschiiLolium perenne62.6250.3184.69320forward
CNT30229721Aegilops tauschiiAnanas comosus37.968.2688.66194forward
CNT30219415Aegilops tauschiiKalanchoe fedtschenkoi29.3548.0881.33150forward
CNT30680618Aegilops tauschiiTriticum urartu59.131.4396.69302forward
CNT30720416Aegilops tauschiiTriticum spelta53.0345.0996.68271forward
CNT30596639Aegilops tauschiiOryza meridionalis42.0712.9990.7215forward
CNT30370623Aegilops tauschiiOryza glumipatula42.0715.5691.16215forward
CNT30102749Aegilops tauschiiOryza rufipogon57.7342.5190.51295forward
CNT30577064Aegilops tauschiiOryza barthii42.0728.1491.16215forward
CNT30581253Aegilops tauschiiEchinochloa crusgalli56.5647.5391289forward
CNT30116951Aegilops tauschiiOryza nivara39.7313.7390.15203forward
CNT30551395Aegilops tauschiiOryza brachyantha42.0724.8393.02215forward
CNT3039307Aegilops tauschiiMarchantia polymorpha28.5743.9880.82146forward

Expression of CNT30436081

Peptides detected in this lncRNA

>peptide 1 (70 aa)
CIKLPLVHILQITKSQQLSYVIRPALINKGSLRYPLIHHSSYKTKARSLHGRAFVHFAAELTEIARPPTT*

>peptide 2 (51 aa)
MVVCSGSLRWVAQLLSGPLPVATMARRACLISASCRVSFFSGSAASPSGSK*

Sequence

>CNT30436081
TGCATTAAGTTACCATTGGTTCATATTTTACAAATCACCAAGTCCCAGCAGCTCTCCTATGTGATCAGACCTGCATTAATCAACAAAGGATCTTTGCGAT
ACCCTCTCATCCATCACTCGTCATACAAAACCAAAGCACGTTCGTTACACGGACGCGCGTTCGTCCATTTTGCTGCTGAGCTGACAGAAATTGCTCGACC
ACCGACCACTTAAGAGGAACCCAAGGTGTCGAAGATGGTGGTGTGCAGCGGGTCGCTGAGGTGGGTGGCCCAGTTGTTGAGCGGCCCCTTGCCGGTGGCG
ACCATGGCGAGGCGGGCGTGCTTGATCTCCGCCAGCTGCAGAGTCTCCTTCTTCTCCGGGTCCGCCGCGAGCCCCAGCGGGTCGAAGTAGGAGCCACCGG
GGTAGAGCCTCCTCTCCGGGTCCAGCTCCGCGTTGCGCTGGAACTCGATGTACCCGATCACCAGCACCTCGATCCAGATCAGCGTGGTGAGCGTGAACGG
CAGCGGCTGCC