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Detailed information on CNT30659570


BLAST search results

BLAST vs Swiss-Prot:
sp|P36494|CB4_SPIOL, E-value = 2e-06

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672091Triticum dicoccoidesSetaria viridis32.1240.6589.77176forward
CNT30526506Triticum dicoccoidesPhaseolus vulgaris20.449.4583.93112forward
CNT30290543Triticum dicoccoidesTriticum aestivum78.65104.1193.74431forward
CNT30554457Triticum dicoccoidesOryza glaberrima40.6918.5789.69223forward
CNT30436081Triticum dicoccoidesAegilops tauschii93.2510095.89511forward
CNT30243199Triticum dicoccoidesAvena sativa56.7554.3792.93311forward
CNT30338967Triticum dicoccoidesEragrostis tef28.8332.3889.87158forward
CNT30370789Triticum dicoccoidesOryza glumipatula40.6916.2189.69223forward
CNT30328621Triticum dicoccoidesAsparagus officinalis18.2533.5684100forward
CNT30147796Triticum dicoccoidesBrachypodium distachyon24.4533.7594.03134forward
CNT30102749Triticum dicoccoidesOryza rufipogon54.9343.3786.05301forward
CNT30581253Triticum dicoccoidesEchinochloa crusgalli56.5750.9990.65310forward
CNT30116951Triticum dicoccoidesOryza nivara40.6915.0889.24223forward
CNT30556512Triticum dicoccoidesPanicum hallii2528.2589.05137forward
CNT3039307Triticum dicoccoidesMarchantia polymorpha26.6443.9880.82146forward

Expression of CNT30659570

Peptides detected in this lncRNA

>peptide 1 (95 aa)
MVVCSGSLRWVAQLLSGPLPVAAGVLDLRQLQSLLLHRVRRESQRVEVGATGVEPPLRVQLRVALELDVPDHQHLDPDQRGERERQRLPQVRRPVH

Sequence

>CNT30659570
TTAGCTCAAGATTGATGTACAAGTGGATGCATTAAGTCACCATTGGTTCATATTTTACAAATCACCAAGTCCCAGCAGCTCTCCTATGTGATCAGACCTG
CATTAATCAACAAAGGATCTTTGCGATACCCTCTCATCCATCACTCGTCATACAAAACCAAAGCACGTTCGTACACTGACGCGCGTTCGTCCATTTTGCA
GCTGAGCTGACAGAAATTGCTCGACCACCGACCACTTAAGAGGAGCCGAAGGTGTCGAAGATGGTGGTGTGCAGCGGGTCGCTGAGGTGGGTGGCCCAGT
TGTTGAGTGGCCCCTTGCCGGTGGCGGCGGGCGTGCTTGATCTCCGCCAGCTGCAGAGTCTCCTTCTTCACCGGGTCCGCCGCGAGTCCCAGCGGGTCGA
AGTAGGAGCCACCGGGGTAGAGCCTCCTCTCCGGGTCCAGCTCCGCGTTGCGCTGGAACTCGATGTACCCGATCACCAGCACCTCGATCCAGATCAACGT
GGTGAGCGTGAACGGCAGCGGCTGCCCCAGGTACGACGACCCGTCCAC