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Detailed information on CNT30175700

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30271054	Vigna angularis	Chenopodium quinoa	20.14	3.6	82.35	119	forward

Expression of CNT30175700

Peptides detected in this lncRNA

>peptide 1 (76 aa)
MMARQHSCNGTISVSIIKVVISSSKLSCVIFNFVPPVDSRYLSSWPGMLCWLSLGFDHHDSAICLNTKSRRTSLSQ*

>peptide 2 (30 aa)
TCITSSCGALLASELCSESLISRHVKFKMA*

>peptide 3 (42 aa)
MASPCCSCFEICLQIFVIALHIAEFHSYDTSVVQIINKSQFR*

Sequence

>CNT30175700
ACCTGCATTACGAGCTCCTGTGGTGCACTTTTGGCATCTGAGCTTTGTTCTGAGTCTCTCATCTCAAGACACGTAAAGTTCAAAATGGCATGATGGCGAG
ACAGCATTCTTGCAATGGGACGATATCCGTCTCTATCATTAAGGTTGTAATATCCAGCAGTAAGCTCAGCTGCGTGATTTTCAACTTTGTACCACCAGTG
GATTCCAGATACCTGTCATCATGGCCAGGAATGCTTTGTTGGCTTTCTCTAGGATTTGATCACCATGACTCAGCAATTTGTTTGAATACCAAGTCAAGAA
GAACTTCCCTTTCTCAGTGACATACGTGCCATTTGATTTGAAGAATCCAGTAGATTCGGGAACATCATTGTACTGGCCTGCGTCATCTGGCAGTTCCCAT
TCAGGATGGCCAGCCCTTGCTGCAGCTGCTTTGAAATCTGCCTTCAAATATTTGTCATAGCACTGCATATTGCAGAATTTCATTCTTATGATACTTCAGT
TGTTCAAATAATCAACAAATCCCAGTTTCGATGAGAAACAACTCTGTTTTGAAAGATAAGACCAGACTCACCTGAAATTCTCCAATACCAG