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Detailed information on CNT30243706


BLAST search results

BLAST vs Swiss-Prot:
sp|Q00434|PSBP_WHEAT, E-value = 4e-80

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673818Avena sativaSetaria viridis27.2441.4789.87158forward
CNT30290454Avena sativaTriticum aestivum29.8380.0997.69173forward
CNT30133222Avena sativaLolium perenne102.4165.6492.76594forward

Expression of CNT30243706

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MLEGNRPLVHPFLMYNQRNTHMHMPSSTRTVHP*

Sequence

>CNT30243706
ATTAGTACTAAGATTTCTTAATCGCTGTCCAGACATGAATGCTTGAGGGAAATCGACCTCTTGTTCATCCATTCCTCATGTACAATCAAAGAAACACACA
CATGCACATGCCCTCTTCTACACGTACGGTGCATCCCTGAGCAAATTCGATTAAATTCAGGGATCATGTTTATGCGACGCTGAAGGATCCCGCGGCGTTC
TCGACGAACTTCTTGGCGCCCTTGAACCACCTCTTGTCTCCGGCCTGCGCCTTGCAGACGTAGAGCTTGCCGTCGGCGACGGTGGCGGTGATGAGCTGGT
GCTTCCCTCCCTCGTCCCCGTCCGCCGTCCTCGTGAGCACCGTTATGCTGTAGAACTGCTCAGGGGATCCGTACTCTGTGATGGTCTTCTTGGTGGTGGG
GTTGATTACGACGGAGAGGTTGCTGGTGGCGTCGAAGTTGTCCTCGTAGCGGAGCACCTGGCCGGGGAACTCACGCTCCTTGCTCGGGTTCCACTTGGCC
GGGATCAACAGCTTGAAACCCTCCCCGCTGTACGTCTTGAAGTCCGTGTTCTTCTTCGCCTTCCCGAACACGTTCGCTGC