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Detailed information on CNT30227157


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30307544Hordeum vulgareTriticum aestivum42.912694.27227forward
CNT30669164Hordeum vulgareTriticum dicoccoides42.9125.4294.27227forward
CNT30687477Hordeum vulgareTriticum urartu42.9134.8294.27227forward

Expression of CNT30227157

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MRTRFSSVYLPGTKLVAKAHALLLTGSARMLCAWTKLGLPR*

>peptide 2 (47 aa)
MVMRPPPRTYEAPASFIAGEESAMVVAAIACCRMEQSKLLMCGCCCD*

Sequence

>CNT30227157
TGTCCACACATATTCATTCATTTGGAAAATGAAAACCATGCATTTCTCATATAGACATTTCATGTTCCATATGGGCCCTCAATTGTAAACATCTTTGATA
GTGTACAACATCAACGATCCGATATTAGTCATACATCCAGAGTACACACATACTCATGAGAACTCGATTTTCAAGTGTTTACTTGCCGGGCACGAAGTTG
GTGGCGAAGGCCCACGCGTTGTTGTTGACGGGGTCGGCGAGGATGCTCTGCGCGTGGACCAAGCTAGGATTGCCGAGGTAGAGCACGCGGTCGGGGCCAT
ACCACGGGCTGCTGGAGGTGGCAGCCTTGGCCGCGGTCTTGCGCATGGTGATGCGGCCGCCGCCGAGGACGTACGAGGCTCCGGCGAGCTTCATCGCGGG
GGAGGAGAGCGCCATGGTCGTCGCCGCCATTGCTTGCTGCCGGATGGAACAGAGCAAGCTGCTGATGTGCGGCTGCTGCTGCGACTGATGGGTGGCTGCG
TGAGGAAGAGAGGGGCAAGGCAGGAAGGT