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Detailed information on CNT30669164


BLAST search results

BLAST vs Swiss-Prot:
sp|P07370|CB2B_SOLLC, E-value = 3e-120

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30227157Triticum dicoccoidesHordeum vulgare25.4242.9194.27227forward
CNT30140865Triticum dicoccoidesLolium perenne29.2348.9792.72261forward

Expression of CNT30669164

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MAQRQWITSSSRFLAKVSGSAERPAVSHP*

>peptide 2 (39 aa)
MVTRPPPSAYEAPASLIAGEESAIVVEAAIAAGWNRASC*

>peptide 3 (29 aa)
PLVFIWKMKTMHFSYRHFMFQMGAICKHL*

>peptide 4 (43 aa)
MACTKYPNMENIARRPFLISFTLSSANASGSSARPRGSKLPPG*

>peptide 5 (69 aa)
MCLLAGHKVGGEGPRVVVDGVGEVVSEVLKRTLTGDDGLHKVSKHGEHCKAAVLDLLHLELGKRLWIVS*

Sequence

>CNT30669164
GTCCACTCGTATTCATATGGAAAATGAAAACCATGCATTTCTCATATAGACATTTCATGTTCCAGATGGGCGCTATTTGTAAACATCTTTGATAGTGTAC
AACATCAACGATCAGATATTAATCATACATCCAGAGCACACATATACTCCTGAGAAGTCGATTTTCATGTGTTTACTTGCCGGGCACAAAGTTGGTGGCG
AAGGCCCACGCGTTGTTGTTGACGGGGTCGGCGAGGTGGTCAGCGAGGTTCTCAAGCGGACCCTTACCGGTGACGATGGCCTGCACAAAGTATCCAAACA
TGGAGAACATTGCAAGGCGGCCGTTCTTGATCTCCTTCACCTTGAGCTCGGCAAACGCCTCTGGATCGTCAGCTAGGCCAAGGGGGTCGAAGCTGCCACC
GGGGTAGAGTGGGTCGACGATCTCTCCGAGCGGGCCACCAGCAACGCGGCCGCCCTCGCTGAAGATCTGGGAGCCGGCCTTGAACCAGACGGCCTCGCCG
AACTTGACGCCGTTGCGGGCGAGCAGCTCGGGGAAGACGCAGCCGAGCGCGCCGAGCATGGCCCAGCGGCAGTGGATCACCTCGAGCTCGCGGTTCTTGG
CGAAGGTCTCCGGGTCGGCGGAGAGGCCCGCGGTGTCCCACCCGTAGTCGCCCGGGAACTCGCCGCTGAGGTAGAGCACGCGGTCGGGGCCGTACCAGGG
GCTGTTGGAGGCGGCGGCCTTGGGCGCGGCCTTGCGCATGGTGACGCGGCCGCCGCCGAGCGCGTACGAGGCTCCGGCGAGCTTGATCGCGGGGGAGGAG
AGCGCCATTGTGGTGGAGGCCGCCATTGCTGCCGGATGGAACAGAGCAAGCTGCTGATGTGCGGCTGCCGCTGCTACTGATGGCTGCGTGAGG