Detailed information on CNT30224101


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30520411Hordeum vulgareSetaria italica44.6623.1692.92113forward
CNT30394760Hordeum vulgareTriticum turgidum83.7930.8189.62212forward
CNT30250210Hordeum vulgareAvena sativa24.5111.6596.7762forward
CNT30666063Hordeum vulgareTriticum dicoccoides75.8943.6490.1192forward
CNT30449622Hordeum vulgareSaccharum spontaneum28.8511.589.0473forward
CNT3013389Hordeum vulgareZea mays28.8516.8290.4173forward
CNT30362297Hordeum vulgareSorghum bicolor44.6620.3693.81113forward
CNT30103477Hordeum vulgareOryza rufipogon28.4612.1884.7272forward
CNT30581096Hordeum vulgareEchinochloa crusgalli48.2215.4686.89122forward

Expression of CNT30224101

Peptides detected in this lncRNA

>peptide 1 (83 aa)
LTYIHTHDGTSSAYTELMKTRRITTAKPLRPARRQAGETDGSAEEGRVVSVAGGGEDVVGDDVEADGVVGLEDPGELLGALVAG

Sequence

>CNT30224101
CTCACATACATACATACTCATGATGGTACGTCATCAGCGTATACAGAACTAATGAAAACACGGCGGATTACAACAGCAAAGCCGCTCCGGCCGGCACGCA
GGCAGGCAGGGGAGACGGACGGATCAGCCGAAGAAGGGAGGGTCGTATCCGTTGCTGGTGGTGGCGAGGATGTAGTAGGCGACGATGTTGAAGCCGACGG
GGTCGTTGGACTTGAGGATCCCGGCGAACTCCTTGGCGCGCTCGTCGCCGGCC